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Showing search results (1–4 of 4):

  1. xREI
    Resource Category : Webserver -> DNA -> Gene Prediction

    Brief Description : xREI is a web interface that allows users to explore a range of predefined phylo-grammars or create their own phylo-grammar. Grammars are visualized via state transition graphs and substitution matrices. xREI is based on xrate, the flexible software tool for modeling structural and phylogenetic variation in multiple sequence alignments.

    Institute/s :
    Department of Bioengineering, University of California, Berkeley, USA.
    Country : United States


    Authors/Contributors : Barquist L, Holmes I.
    Year : 2008



  2. xREI
    Resource Category : Webserver -> DNA -> Utilities

    Brief Description : xREI is a web interface that allows users to explore a range of predefined phylo-grammars or create their own phylo-grammar. Grammars are visualized via state transition graphs and substitution matrices. xREI is based on xrate, the flexible software tool for modeling structural and phylogenetic variation in multiple sequence alignments.

    Institute/s :
    Department of Bioengineering, University of California, Berkeley, USA
    Address of Institute/s :
    Department of Bioengineering, University of California, Berkeley, USA
    Country : United States


    Authors/Contributors : Barquist L, Holmes I.
    Year : 2008



  3. xREI
    Resource Category : Webserver -> Protein -> 2-D Structure Prediction

    Brief Description : xREI is a web interface that allows users to explore a range of predefined phylo-grammars or create their own phylo-grammar. Grammars are visualized via state transition graphs and substitution matrices. xREI is based on xrate, the flexible software tool for modeling structural and phylogenetic variation in multiple sequence alignments. Classification Category: DNA

    Institute/s :
    Department of Bioengineering, University of California, Berkeley, USA
    Address of Institute/s :
    Department of Bioengineering, University of California, Berkeley, USA
    Country : United States


    Authors/Contributors : Barquist L, Holmes I.
    Year : 2008



  4. xREI
    Resource Category : Webserver -> RNA -> Functional RNAs

    Brief Description : xREI is a web interface that allows users to explore a range of predefined phylo-grammars or create their own phylo-grammar. Grammars are visualized via state transition graphs and substitution matrices. xREI is based on xrate, the flexible software tool for modeling structural and phylogenetic variation in multiple sequence alignments.

    Institute/s :
    Department of Bioengineering, University of California, Berkeley, USA
    Address of Institute/s :
    Department of Bioengineering, University of California, Berkeley, USA
    Country : United States


    Authors/Contributors : Barquist L, Holmes I.
    Year : 2008