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  1. ZOOM Lite (View Publication)
    Resource Category : Software
    Accesibility : Free

    Brief Description : ZOOM Lite, is a software for efficient reads mapping and result visualization. With a kernel capable of mapping tens of millions of Illumina or AB SOLiD sequencing reads efficiently and accurately, and an intuitive graphical user interface, ZOOM Lite integrates reads mapping and result visualization into a easy to use pipeline on desktop PC. The software handles both single-end and paired-end reads, and can output both the unique mapping result or the top N mapping results for each read. Additionally, the software takes a variety of input file formats and outputs to several commonly used result formats. The software is freely available at http://bioinfor.com/zoom/lite/.
    Subject Area : Chromosome Mapping


    Institute/s :
    University of Waterloo, Waterloo, Canada
    Address of Institute/s :
    David R. Cheriton School of Computer Science, University of Waterloo, Waterloo, ON N2L 3G1, Canada
    Country : Canada


    Authors/Contributors : Bin Ma
    Contact Email : binma@uwaterloo.ca
    Name of the Developer : Bioinformatics Solutions Inc., Waterloo, Canada
    Address of the Developer : Bioinformatics Solutions Inc. Corporate Headquarters 470 Weber St. N. Suite 204 Waterloo, ON Canada N2L 6J2

    Keywords : *Chromosome Mapping; *Computer Graphics; Internet; *Sequence Analysis, DNA; *Software; User-Computer Interface