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  1. T4-like genome DB (View Publication)
    Full Name of the Resource : Sequences of T4-like bacteriophages from various sources
    Resource Category : Databases -> Genomic Databases (Non-Human) -> Viral Genome Databases

    Brief Description : The T4-like bacteriophage genome database is a compilation of information resources for T4-like Bacteriophage Genomes. Both unpublished and GenBank data are included. At present 9 completed genomes are available. Sequences originate both from the Tulane T4-like Sequencing project and from data submitted by outside researchers. Interactive browsing of completed phage genomes is available using the program. The browser allows users to scan the genome for particular features and to download sequence information plus analyses of those features. Views of the genome are generated showing named genes, BLAST similarities to other phages, predicted tRNAs, and other sequence features. Links are provided from the browser to gene-specific pages, with DNA sequence, protein sequence, protein statistics, interactive sequence alignment to orthologs, hydropathy plots and Pfam protein domain matches. A T4-like phage BLAST server is available to allow researchers to rapidly search a focused set of genomes. Links to additional phage information are also available, including Genetic Map figures, electron micrographs, annotation tables, sequence files, and links to GenBank annotations. Links to other web sites with information about T4-like bacteriophage are also listed.
    Subject Area : Bacteriophage Genome


    Institute/s :
    Department of Biochemistry, Tulane University Health Sciences Center, USA
    Address of Institute/s :
    Department of Biochemistry, Tulane University Health Sciences Center, New Orleans, LA 70112, USA
    Country : United States

    Associated Institutes :

    • Department of Biochemistry, Tulane University Health Sciences Center, New Orleans, LA 70112, USA

    Associated Country : USA


    Authors/Contributors : Nolan J.M.
    Contact Email : jnolan@tulane.edu
    Year : 2006
    Language : English

    Keywords : Aeromonas hydrophila/*virology; Aeromonas salmonicida/*virology; Animals; Bacteriophage T4/*genetics; Bacteriophages/*classification/genetics; Base Sequence; Coliphages/*genetics; Computational Biology/methods; *Genetic Variation; Genome, Viral; Humans; Mice; Molecular Sequence Data; Open Reading Frames/genetics; RNA, Transfer/chemistry/genetics; Sequence Alignment; Viral Proteins/genetics


  2. T4-like genome DB
    Full Name of the Resource : Sequences of T4-like bacteriophages from various sources
    Resource Category : Databases -> Genomic Databases (Non-Human) -> Viral Genome Databases

    Brief Description : The T4-like bacteriophage genome database is a compilation of information resources for T4-like Bacteriophage Genomes. Both unpublished and GenBank data are included. At present 9 completed genomes are available. Sequences originate both from the Tulane T4-like Sequencing project and from data submitted by outside researchers. Interactive browsing of completed phage genomes is available using the program. The browser allows users to scan the genome for particular features and to download sequence information plus analyses of those features. Views of the genome are generated showing named genes, BLAST similarities to other phages, predicted tRNAs, and other sequence features. Links are provided from the browser to gene-specific pages, with DNA sequence, protein sequence, protein statistics, interactive sequence alignment to orthologs, hydropathy plots and Pfam protein domain matches. A T4-like phage BLAST server is available to allow researchers to rapidly search a focused set of genomes. Links to additional phage information are also available, including Genetic Map figures, electron micrographs, annotation tables, sequence files, and links to GenBank annotations. Links to other web sites with information about T4-like bacteriophage are also listed.
    Subject Area : Bacteriophage


    Institute/s :
    Department of Biochemistry, Tulane University Health Sciences Center, New Orleans, LA 70112, USA
    Country : United States


    Authors/Contributors : Nolan J.M.
    Contact Email : jnolan@tulane.edu
    Language : English