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Showing search results (1–9 of 9):

  1. T-COFFEE (View Publication)
    Resource Category : Webserver -> DNA -> Phylogeny Reconstruction

    Brief Description : The T-COFFEE site includes links to a collection of tools for computing, evaluating, and manipulating multiple alignments of protein sequences and structures. T-COFFEE is a protein multiple sequence alignment tool that is more accurate than ClustalW for sequences with less than 30 percent identity. Expresso (or 3DCoffee) aligns sequences using structural information. PROTOGENE turns amino acid alignments into CDS nucleotide alignments. M-Coffee is a meta-method for computing multiple sequence alignments by combining alternative alignment methods.

    Institute/s :
    3Information Genomique et Structurale, CNRS UPR2589, Institute for Structural Biology and Microbiology (IBSM), Parc Scientifique de Luminy, 163 Avenue de Luminy, FR- 13288, Marseille cedex 09, France
    Address of Institute/s :
    3Information G?nomique et Structurale, CNRS UPR2589, Institute for Structural Biology and Microbiology (IBSM), Parc Scientifique de Luminy, 163 Avenue de Luminy, FR- 13288, Marseille cedex 09, France
    Country : France

    Associated Institutes :

    • Swiss Institute of Bioinformatics, B?timent G?nopode, UNIL, CH-101 Lausanne, Switzerland
    • Conway Institute, University College Dublin, Belfield, Dublin 4, Ireland
    • Information Genomique et Structurale, CNRS UPR2589, Institute for Structural Biology and Microbiology (IBSM), Parc Scientifique de Luminy, 163 Avenue de Luminy, FR- 13288, Marseille cedex 09, France

    Associated Country : Switzerland; Ireland; France


    Authors/Contributors : Sebastien Moretti; Fabrice Armougom; Iain M. Wallace; Desmond G. Higgins; Cornelius V. Jongeneel; Cedric Notredame
    Contact Email : cedric.notredame@europe.com
    Year : 2007


  2. T-COFFEE (View Publication)
    Resource Category : Webserver -> Protein -> 3-D Structure Comparison

    Brief Description : The T-COFFEE site includes links to a collection of tools for computing, evaluating, and manipulating multiple alignments of protein sequences and structures. T-COFFEE is a protein multiple sequence alignment tool that is more accurate than ClustalW for sequences with less than 30 percent identity. Expresso (or 3DCoffee) aligns sequences using structural information. PROTOGENE turns amino acid alignments into CDS nucleotide alignments. M-Coffee is a meta-method for computing multiple sequence alignments by combining alternative alignment methods.

    Institute/s :
    Swiss Institute of Bioinformatics, Bâtiment Génopode, UNIL, CH-101 Lausanne.
    Address of Institute/s :
    Swiss Institute of Bioinformatics, Bâtiment Génopode, UNIL, CH-101 Lausanne.


    Authors/Contributors : Moretti S, Armougom F, Wallace IM, Higgins DG, Jongeneel CV, Notredame C.
    Contact Email : cedric.notredame@europe.com
    Year : 2007



  3. T-COFFEE (View Publication)
    Resource Category : Webserver -> Protein -> Phylogeny Reconstruction

    Brief Description : The T-COFFEE site includes links to a collection of tools for computing, evaluating, and manipulating multiple alignments of protein sequences and structures. T-COFFEE is a protein multiple sequence alignment tool that is more accurate than ClustalW for sequences with less than 30 percent identity. Expresso (or 3DCoffee) aligns sequences using structural information. PROTOGENE turns amino acid alignments into CDS nucleotide alignments. M-Coffee is a meta-method for computing multiple sequence alignments by combining alternative alignment methods.

    Institute/s :
    Swiss Institute of Bioinformatics, Bâtiment Génopode, UNIL, CH-101 Lausanne.
    Address of Institute/s :
    Swiss Institute of Bioinformatics, Bâtiment Génopode, UNIL, CH-101 Lausanne.
    Country : Lausanne


    Authors/Contributors : Moretti S, Armougom F, Wallace IM, Higgins DG, Jongeneel CV, Notredame C.
    Contact Email : cedric.notredame@europe.com
    Year : 2007



  4. T-COFFEE (View Publication)
    Resource Category : Webserver -> Protein -> Presentation and Format

    Brief Description : The T-COFFEE site includes links to a collection of tools for computing, evaluating, and manipulating multiple alignments of protein sequences and structures. T-COFFEE is a protein multiple sequence alignment tool that is more accurate than ClustalW for sequences with less than 30 percent identity. Expresso (or 3DCoffee) aligns sequences using structural information. PROTOGENE turns amino acid alignments into CDS nucleotide alignments. M-Coffee is a meta-method for computing multiple sequence alignments by combining alternative alignment methods.

    Institute/s :
    Swiss Institute of Bioinformatics, Bâtiment Génopode, UNIL, CH-101 Lausanne.
    Address of Institute/s :
    Swiss Institute of Bioinformatics, Bâtiment Génopode, UNIL, CH-101 Lausanne.
    Country : Lausanne


    Authors/Contributors : Moretti S, Armougom F, Wallace IM, Higgins DG, Jongeneel CV, Notredame C.
    Contact Email : cedric.notredame@europe.com
    Year : 2007



  5. T-COFFEE (View Publication)
    Resource Category : Webserver -> Sequence Comparison -> Alignment Editing and Visualization

    Brief Description : The T-COFFEE site includes links to a collection of tools for computing, evaluating, and manipulating multiple alignments of protein sequences and structures. T-COFFEE is a protein multiple sequence alignment tool that is more accurate than ClustalW for sequences with less than 30 percent identity. Expresso (or 3DCoffee) aligns sequences using structural information. PROTOGENE turns amino acid alignments into CDS nucleotide alignments. M-Coffee is a meta-method for computing multiple sequence alignments by combining alternative alignment methods.

    Institute/s :
    Swiss Institute of Bioinformatics, Bâtiment Génopode, UNIL, CH-101 Lausanne.
    Address of Institute/s :
    Swiss Institute of Bioinformatics, Bâtiment Génopode, UNIL, CH-101 Lausanne.
    Country : Lausanne


    Authors/Contributors : Moretti S, Armougom F, Wallace IM, Higgins DG, Jongeneel CV, Notredame C.
    Contact Email : cedric.notredame@europe.com
    Year : 2007



  6. T-COFFEE (View Publication)
    Resource Category : Webserver -> Sequence Comparison -> Analysis of Aligned Sequences

    Brief Description : The T-COFFEE site includes links to a collection of tools for computing, evaluating, and manipulating multiple alignments of protein sequences and structures. T-COFFEE is a protein multiple sequence alignment tool that is more accurate than ClustalW for sequences with less than 30 percent identity. Expresso (or 3DCoffee) aligns sequences using structural information. PROTOGENE turns amino acid alignments into CDS nucleotide alignments. M-Coffee is a meta-method for computing multiple sequence alignments by combining alternative alignment methods.

    Institute/s :
    Swiss Institute of Bioinformatics, Bâtiment Génopode, UNIL, CH-101 Lausanne.
    Address of Institute/s :
    Swiss Institute of Bioinformatics, Bâtiment Génopode, UNIL, CH-101 Lausanne.
    Country : Lausanne


    Authors/Contributors : Moretti S, Armougom F, Wallace IM, Higgins DG, Jongeneel CV, Notredame C.
    Contact Email : cedric.notredame@europe.com
    Year : 2007



  7. T-COFFEE (View Publication)
    Resource Category : Webserver -> Sequence Comparison -> Multiple Sequence Alignments

    Brief Description : The T-COFFEE site includes links to a collection of tools for computing, evaluating, and manipulating multiple alignments of protein sequences and structures. T-COFFEE is a protein multiple sequence alignment tool that is more accurate than ClustalW for sequences with less than 30 percent identity. Expresso (or 3DCoffee) aligns sequences using structural information. PROTOGENE turns amino acid alignments into CDS nucleotide alignments. M-Coffee is a meta-method for computing multiple sequence alignments by combining alternative alignment methods.

    Institute/s :
    Swiss Institute of Bioinformatics, Bâtiment Génopode, UNIL, CH-101 Lausanne.
    Address of Institute/s :
    Swiss Institute of Bioinformatics, Bâtiment Génopode, UNIL, CH-101 Lausanne.
    Country : Lausanne


    Authors/Contributors : Moretti S, Armougom F, Wallace IM, Higgins DG, Jongeneel CV, Notredame C.
    Contact Email : cedric.notredame@europe.com
    Year : 2007



  8. T-COFFEE (View Publication)
    Resource Category : Webserver -> Sequence Comparison -> Other Alignment Tools

    Brief Description : The T-COFFEE site includes links to a collection of tools for computing, evaluating, and manipulating multiple alignments of protein sequences and structures. T-COFFEE is a protein multiple sequence alignment tool that is more accurate than ClustalW for sequences with less than 30 percent identity. Expresso (or 3DCoffee) aligns sequences using structural information. PROTOGENE turns amino acid alignments into CDS nucleotide alignments. M-Coffee is a meta-method for computing multiple sequence alignments by combining alternative alignment methods.

    Institute/s :
    Swiss Institute of Bioinformatics, Bâtiment Génopode, UNIL, CH-101 Lausanne.
    Address of Institute/s :
    Swiss Institute of Bioinformatics, Bâtiment Génopode, UNIL, CH-101 Lausanne.
    Country : Lausanne


    Authors/Contributors : Moretti S, Armougom F, Wallace IM, Higgins DG, Jongeneel CV, Notredame C.
    Contact Email : cedric.notredame@europe.com
    Year : 2007



  9. T-COFFEE (View Publication)
    Resource Category : Webserver -> Sequence Comparison -> Similarity Searching

    Brief Description : The T-COFFEE site includes links to a collection of tools for computing, evaluating, and manipulating multiple alignments of protein sequences and structures. T-COFFEE is a protein multiple sequence alignment tool that is more accurate than ClustalW for sequences with less than 30 percent identity. Expresso (or 3DCoffee) aligns sequences using structural information. PROTOGENE turns amino acid alignments into CDS nucleotide alignments. M-Coffee is a meta-method for computing multiple sequence alignments by combining alternative alignment methods.

    Institute/s :
    Swiss Institute of Bioinformatics, Bâtiment Génopode, UNIL, CH-101 Lausanne.
    Address of Institute/s :
    Swiss Institute of Bioinformatics, Bâtiment Génopode, UNIL, CH-101 Lausanne.
    Country : Lausanne


    Authors/Contributors : Moretti S, Armougom F, Wallace IM, Higgins DG, Jongeneel CV, Notredame C.
    Contact Email : cedric.notredame@europe.com
    Year : 2006