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  1. PINT (View Publication)
    Full Name of the Resource : Protein-protein interactions thermodynamic database
    Resource Category : Databases -> Protein Sequence Databases -> Protein properties

    Brief Description : The first release of Protein-protein Interactions Thermodynamic Database (PINT) contains more than 1500 data of several thermodynamic parameters along with sequence and structural information, experimental conditions and literature information. Each entry contains numerical data for the free energy change, dissociation constant, association constant, enthalpy change, heat capacity change and so on of the interacting proteins upon binding, which are important for understanding the mechanism of protein-protein interactions. PINT also includes the name and source of the proteins involved in binding, their Protein Information Resource, SWISS-PROT and Protein Data Bank (PDB) codes, secondary structure and solvent accessibility of residues at mutant positions, measuring methods, experimental conditions, such as buffers, ions and additives, and literature information. A WWW interface facilitates users to search database on various conditions, feasibility to select the terms for output and different sorting options. Further, PINT is cross-linked with other related databases, PIR, SWISS-PROT, PDB and NCBI PUBMED literature database. The database is freely available at http://www.bioinfodatabase.com/pint/index.html
    Subject Area : Protein - Protein Interactions


    Institute/s :
    Department of Biochemical Engineering and Science, Kyushu Institute of Technology, Fukuoka, Japan
    Address of Institute/s :
    Department of Biochemical Engineering and Science, Kyushu Institute of Technology, Iizuka 820-8502, Fukuoka, Japan
    Country : Japan

    Associated Institutes :

    • Department of Biochemical Engineering and Science, Kyushu Institute of Technology Iizuka 820-8502, Fukuoka, Japan
    • Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST) AIST Tokyo Waterfront Bio-IT Research Building, 2-42 Aomi, Koto-ku, Tokyo 135-0064, Japan

    Associated Country : Japan


    Authors/Contributors : M. D. Shaji Kumar
    Contact Email : shaji@bse.kyutech.ac.jp, admin@bioinfodatabase.com
    Year : 2005
    Language : English

    Keywords : Breast Neoplasms / metabolism; Cyclin D / metabolism; Female; Humans; Internet; Models, Biological; Receptor, erbB-2 / metabolism; Signal Transduction; Software; rac GTP-Binding Proteins / metabolism; ras Proteins / metabolism