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  1. NCBI Viral Genomes (View Publication)
    Full Name of the Resource : Viral genome resource at NCBI
    Resource Category : Databases -> Genomic Databases (Non-Human) -> Viral Genome Databases

    Brief Description : The NCBI Viral Genomes Resource (http://www.ncbi.nlm.nih.gov/genomes/VIRUSES/viruses.html) provides sequence information, as well as precomputed comparative analyses and Web tools, for all viruses and viroids for which (nearly) complete genomic sequences have been established and deposited to DDBJ, EMBL, or GeneBank. The collection currently contains over 2200 reference sequences (RefSeq) and about 6,500 additional complete sequences for more than 1,500 different viral species. The reference sequences are maintained in separate records that are further curated and updated. Whenever more than one complete genome for a species is available, a pairwise global alignment of a reference sequence with each additional sequence is provided. Precomputed clusters of related proteins (VOG) from the reference sequences help navigate among viral proteomes and summarize available functional information for most major virus groups. The data are accessible via Entrez as well as from specialized Web pages offering visualization of the sequence information at various levels of detail.
    Subject Area : Viral Genomes


    Institute/s :
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, USA
    Address of Institute/s :
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland 20894, USA
    Country : United States

    Associated Institutes :

    • National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland 20894, USA

    Associated Country : USA


    Authors/Contributors : David L. Wheeler; Tanya Barrett; Dennis A. Benson; Stephen H. Bryant; Kathi Canese; Vyacheslav Chetvernin; Deanna M. Church; Michael DiCuccio; Ron Edgar; Scott Federhen; Lewis Y. Geer; Yuri Kapustin; Oleg Khovayko; David Landsman; David J. Lipman; Thomas L. Madden; Donna R. Maglott; James Ostell; Vadim Miller; Kim D. Pruitt; Gregory D. Schuler; Edwin Sequeira; Steven T. Sherry; Karl Sirotkin; Alexandre Souvorov; Grigory Starchenko; Roman L. Tatusov; Tatiana A. Tatusova; Lukas Wagner; Eugene Yaschenko
    Contact Email : info@ncbi.nlm.nih.gov
    Year : 2007
    Language : English

    Keywords : Animals; *Databases, Genetic; Databases, Nucleic Acid; Databases, Protein; Gene Expression; Genomics; Humans; Internet; *National Library of Medicine (U.S.); Phenotype; Proteomics; PubMed; Sequence Alignment; Software; United States


  2. NCBI Viral Genomes
    Full Name of the Resource : Viral genome resource at NCBI
    Resource Category : Databases -> Genomic Databases (Non-Human) -> Viral Genome Databases

    Brief Description : The NCBI Viral Genomes Resource (http://www.ncbi.nlm.nih.gov/genomes/VIRUSES/viruses.html) provides sequence information, as well as precomputed comparative analyses and Web tools, for all viruses and viroids for which (nearly) complete genomic sequences have been established and deposited to DDBJ, EMBL, or GeneBank. The collection currently contains over 2200 reference sequences (RefSeq) and about 6,500 additional complete sequences for more than 1,500 different viral species. The reference sequences are maintained in separate records that are further curated and updated. Whenever more than one complete genome for a species is available, a pairwise global alignment of a reference sequence with each additional sequence is provided. Precomputed clusters of related proteins (VOG) from the reference sequences help navigate among viral proteomes and summarize available functional information for most major virus groups. The data are accessible via Entrez as well as from specialized Web pages offering visualization of the sequence information at various levels of detail.
    Subject Area : Viral Genome


    Institute/s :
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland 20894, USA
    Country : United States

    Associated Institutes :

    • National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA

    Associated Country : USA


    Year : 2007