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  1. MicroFootPrinter (View Publication)
    Resource Category : Webserver -> DNA -> Structure and Sequence Feature Detection

    Brief Description : MicroFootPrinter identifies the conserved motifs in regulatory regions of prokaryotic genomes using the phylogenetic footprinting program FootPrinter.

    Institute/s :
    Department of Computer Science and Engineering
    University of Washington, Box 352350
    Seattle, WA 98195-2350, USA.

    Address of Institute/s :
    Department of Computer Science and Engineering
    University of Washington, Box 352350
    Seattle, WA 98195-2350, USA.

    Country : United States


    Authors/Contributors : Neph S, Tompa M.
    Contact Email : tompa@cs.washington.edu
    Year : 2006



  2. MicroFootPrinter
    Resource Category : Webserver -> Expression -> Gene Regulation

    Brief Description : FootPrinter is a program for phylogenetic footprinting that identifies regions of DNA that are well conserved across a set of orthologous sequences in order to infer phylogenetic relationships.

    Institute/s :
    Department of Computer Science and Engineering and Department of Genome Sciences, University of Washington, Box 352350, Seattle, WA 98195-2350, USA
    Address of Institute/s :
    Department of Computer Science and Engineering and Department of Genome Sciences, University of Washington, Box 352350, Seattle, WA 98195-2350, USA
    Country : United States

    Associated Institutes :

    • Department of Computer Science and Engineering and Department of Genome Sciences, University of Washington, Box 352350, Seattle, WA 98195-2350, USA

    Associated Country : USA


    Authors/Contributors : Shane Neph; Martin Tompa
    Contact Email : tompa@cs.washington.edu
    Year : 2003


  3. MicroFootPrinter (View Publication)
    Resource Category : Webserver -> Expression -> Gene Regulation

    Brief Description : MicroFootPrinter identifies the conserved motifs in regulatory regions of prokaryotic genomes using the phylogenetic footprinting program FootPrinter.

    Institute/s :
    Department of Computer Science and Engineering, University of Washington, Box 352350, Seattle, WA 98195-2350, USA.
    Address of Institute/s :
    Department of Computer Science and Engineering, University of Washington, Box 352350, Seattle, WA 98195-2350, USA.
    Country : United States


    Authors/Contributors : Neph S, Tompa M.
    Contact Email : tompa@cs.washington.edu
    Year : 2006



  4. MicroFootPrinter (View Publication)
    Resource Category : Webserver -> Model Organisms -> Microbes

    Brief Description : MicroFootPrinter identifies the conserved motifs in regulatory regions of prokaryotic genomes using the phylogenetic footprinting program FootPrinter.

    Institute/s :
    Department of Computer Science and Engineering, University of Washington, Box 352350, Seattle, WA 98195-2350, USA.
    Address of Institute/s :
    Department of Computer Science and Engineering, University of Washington, Box 352350, Seattle, WA 98195-2350, USA.
    Country : United States


    Authors/Contributors : Neph S, Tompa M.
    Contact Email : tompa@cs.washington.edu
    Year : 2006



  5. MicroFootPrinter (View Publication)
    Resource Category : Webserver -> Sequence Comparison -> Comparative Genomics

    Brief Description : MicroFootPrinter identifies the conserved motifs in regulatory regions of prokaryotic genomes using the phylogenetic footprinting program FootPrinter.

    Institute/s :
    Department of Computer Science and Engineering, University of Washington, Box 352350, Seattle, WA 98195-2350, USA.
    Address of Institute/s :
    Department of Computer Science and Engineering, University of Washington, Box 352350, Seattle, WA 98195-2350, USA.
    Country : United States


    Authors/Contributors : Neph S, Tompa M.
    Contact Email : tompa@cs.washington.edu
    Year : 2006