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  1. MetaCyc (View Publication)
    Full Name of the Resource : Metabolic pathways and enzymes from various organisms
    Resource Category : Databases -> Genomic Databases (Non-Human) -> General Genomics Databases

    Brief Description : MetaCyc is a metabolic-pathway database that describes more than 1,100 pathways and 5,000 enzymes occurring in 1,500 organisms (version 12.1, June 2008). The pathways in MetaCyc were determined experimentally, and are labeled with the species in which they are known to occur based on literature references examined to date. MetaCyc contains extensive commentary and literature citations. Applications of MetaCyc include pathway analysis of genomes, metabolic engineering, and biochemistry education. MetaCyc is queried using the Pathway Tools graphical user interface, which provides a wide variety of query operations and visualization tools. MetaCyc is available through the WWW at the URL provided and is available for local installation as a binary program for the Macintosh, PC, and Linux, and as a set of flatfiles.
    Subject Area : Metabolic Pathways


    Institute/s :
    SRI International, 333 Ravenswood, Menlo Park, CA 94025, USA
    Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA 94305, USA.

    Country : United States

    Associated Institutes :

    • SRI International, 333 Ravenswood, Menlo Park, CA 94025, USA
    • Carnegie Institution, Department of Plant Biology, 260 Panama Street, Stanford, CA 94305 USA
    • Boyce Thompson Institute for Plant Research, Tower Road, Ithaca, NY 14853, USA

    Associated Country : USA


    Authors/Contributors : Karp, P.D.
    Contact Email : pkarp@ai.sri.com
    Year : 2010

    Keywords : Animals; Computational Biology / *methods / trends; *Databases, Genetic; *Databases, Nucleic Acid; Databases, Protein; Genome, Archaeal; Genome, Bacterial; Genome, Plant; Genome, Viral; Humans; Information Storage and Retrieval / methods; Internet; Models, Biological; Protein Structure, Tertiary; Software


  2. MetaCyc (View Publication)
    Full Name of the Resource : Metabolic pathways and enzymes from various organisms
    Resource Category : Databases -> Metabolic and Signaling Pathways -> Metabolic Pathways

    Brief Description : MetaCyc is a metabolic-pathway database that describes more than 1,100 pathways and 5,000 enzymes occurring in 1,500 organisms (version 12.1, June 2008). The pathways in MetaCyc were determined experimentally, and are labeled with the species in which they are known to occur based on literature references examined to date. MetaCyc contains extensive commentary and literature citations. Applications of MetaCyc include pathway analysis of genomes, metabolic engineering, and biochemistry education. MetaCyc is queried using the Pathway Tools graphical user interface, which provides a wide variety of query operations and visualization tools. MetaCyc is available through the WWW at the URL provided and is available for local installation as a binary program for the Macintosh, PC, and Linux, and as a set of flatfiles.

    Institute/s :
    SRI International, 333 Ravenswood, Menlo Park, CA 94025, USA
    Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA 94305, USA.

    Country : United States

    Associated Institutes :

    • SRI International, 333 Ravenswood, Menlo Park, CA 94025, USA
    • Carnegie Institution, Department of Plant Biology, 260 Panama Street, Stanford, CA 94305, USA
    • Boyce Thompson Institute for Plant Research, Tower Road, Ithaca, NY 14853, USA

    Associated Country : USA


    Authors/Contributors : Karp, P.D.
    Contact Email : pkarp@ai.sri.com
    Year : 2010
    Language : English

    Keywords : Animals; Computational Biology / *methods / trends; *Databases, Genetic; *Databases, Nucleic Acid; Databases, Protein; Genome, Archaeal; Genome, Bacterial; Genome, Plant; Genome, Viral; Humans; Information Storage and Retrieval / methods; Internet; Models, Biological; Protein Structure, Tertiary; Software