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  1. LAGAN (View Publication)
    Resource Category : Webserver -> Sequence Comparison -> Multiple Sequence Alignments

    Brief Description : The LAGAN alignment toolkit consists of components: CHAOS (a pairwise local aligner optimized for non-coding, and other poorly conserved regions of the genome.), LAGAN (a highly parametrizable pairwise global alignment program), Multi-LAGAN , and Shuffle-LAGAN (both variations of LAGAN).

    Institute/s :
    Department of Computer Science, Stanford University, Stanford, California 94305-9010, USA.
    Address of Institute/s :
    Department of Computer Science, Stanford University, Stanford, California 94305-9010, USA.
    Country : United States

    Associated Institutes :

    • Department of Computer Science, Stanford University, Stanford, California 94305-9010, USA
    • Department of Pathology and Department of Genetics, Stanford University, Stanford, California 94305-5324, USA
    • Genome Technology Branch and NIH Intramural Sequencing Center, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland 20892, USA

    Associated Country : USA


    Authors/Contributors : Michael Brudno; Chuong B. Do; Gregory M. Cooper; Michael F. Kim; Eugene Davydov; Eric D. Green; Arend Sidow; Serafim Batzoglou
    Year : 2003


  2. LAGAN (View Publication)
    Resource Category : Webserver -> Sequence Comparison -> Pairwise Sequence Alignments

    Brief Description : The LAGAN alignment toolkit consists of components: CHAOS (a pairwise local aligner optimized for non-coding, and other poorly conserved regions of the genome.), LAGAN (a highly parametrizable pairwise global alignment program), Multi-LAGAN , and Shuffle-LAGAN (both variations of LAGAN).

    Institute/s :
    Department of Computer Science, Stanford University, Stanford, California 94305-9010, USA.
    Address of Institute/s :
    Department of Computer Science, Stanford University, Stanford, California 94305-9010, USA.
    Country : United States

    Associated Institutes :

    • Department of Computer Science, Stanford University, Stanford, California 94305-9010, USA
    • Department of Pathology and Department of Genetics, Stanford University, Stanford, California 94305-5324, USA
    • Genome Technology Branch and NIH Intramural Sequencing Center, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland 20892, USA

    Associated Country : USA


    Authors/Contributors : Michael Brudno; Chuong B. Do; Gregory M. Cooper; Michael F. Kim; Eugene Davydov; Eric D. Green; Arend Sidow; Serafim Batzoglou
    Year : 2003