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  1. L1Base (View Publication)
    Full Name of the Resource : Functional annotation and prediction of LINE-1 elements
    Resource Category : Databases -> Nucleotide Sequence Databases -> Coding and Coding DNA: Genes, Motifs and Regulatory Sites

    Brief Description : L1Base is a dedicated database containing putatively active LINE-1 (L1) insertions residing in human and rodent genomes: a) intact in the two ORFs, full length L1s (FLI-L1s) and b) L1s with intact ORF2 but disrupted ORF1 (ORF2-L1s). In addition, due to their regulatory potential, the full length (>6000bp) non-intact L1s (FLnI-L1s) were also included in the database.
    Subject Area : Putative Genes


    Institute/s :
    Max Plank Institute, Institute of Molecular Genetics
    Address of Institute/s :
    Max Plank Institute, Institute of Molecular Genetics
    Country : Germany

    Associated Institutes :

    • Department of Computational Molecular Biology, Max-Planck-Institute for Molecular Genetics, Ihnestrasse 73, D-14195 Berlin, Germany
    • Department of Bioinformatics, University of Wuerzburg, Am Hubland, D-97074 Wuerzburg, Germany

    Associated Country : Germany


    Authors/Contributors : Tomasz Zemojtel
    Contact Email : zemojtel@molgen.mpg.de
    Year : 2005
    Language : English

    Keywords : Animals; Binding Sites; Databases, Nucleic Acid; Genomics; Humans; Long Interspersed Nucleotide Elements; Mice; Open Reading Frames; Rats; Transcription Factors / metabolism; User-Computer Interface