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  1. GeneNet
    Resource Category : Databases -> Nucleotide Sequence Databases -> Transcriptional Regulator Sites and Transcription Factors

    Brief Description : The GeneNet system is designed for collection and analysis of the data on gene and metabolic networks, signal transduction pathways, and kinetic characteristics of elementary processes. In the past two years, the GeneNet structure was considerably improved: 1) the current version of the database is now implemented using ORACLE9i; 2) the capacities to describe the structure of the protein complexes and the interactions between the units are increased; 3) two tables with kinetic constants and more detailed descriptions of certain reactions were added; 4) a module for kinetic modeling was supplemented. The current SRS release of the GeneNet database contains 37 graphical maps of gene networks, as well as descriptions of 1766 proteins, 1006 genes, 241 small molecules, and 3254 relationships between gene network units, and 552 kinetic constants. Information distributed between 16 interlinked tables was obtained by annotating 1980 journal publications. SRS release of the GeneNet database, the graphical viewer, and the modeling section are available at http://wwwmgs.bionet.nsc.ru/mgs/systems/genenet/.

    Institute/s :
    Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia
    Address of Institute/s :
    Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Lavrentiev Avenue 10, Novosibirsk 630090, Russia
    Country : Russia

    Associated Institutes :

    • Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Lavrentiev Avenue 10, Novosibirsk 630090, Russia

    Associated Country : Russia


    Authors/Contributors : E. A. Ananko; N. L. Podkolodny; I. L. Stepanenko; O. A. Podkolodnaya; D. A. Rasskazov; D. S. Miginsky; V. A. Likhoshvai; A. V. Ratushny; N. N. Podkolodnaya; N. A. Kolchanov
    Contact Email : eananko@bionet.nsc.ru
    Year : 2004