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  1. GXA
    Resource Category : Databases -> Microarray Data and other Gene Expression Databases -> Microarray Data and other Gene Expression Databases


    Country : USA


    Authors/Contributors : Misha Kapushesky; Tomasz Adamusiak; Tony Burdett; Aedin Culhane; Anna Farne; Alexey Filippov; Ele Holloway; Andrey Klebanov; Nataliya Kryvych; Natalja Kurbatova; Pavel Kurnosov; James Malone; Olga Melnichuk; Robert Petryszak; Nikolay Pultsin; Gabriella Rustici; Andrew Tikhonov; Ravensara S. Travillian; Eleanor Williams; Andrey Zorin; Helen Parkinson; Alvis Brazma
    Year : 2011
    Language : English



  2. GXA
    Resource Category : Databases -> Microarray Data and other Gene Expression Databases -> Microarray Data and other Gene Expression Databases

    Brief Description : The Gene Expression Atlas is an added value database providing information about gene expression in different cell types, organism parts, developmental stages, disease states, sample treatments, and other biological/experimental conditions. The content of this database derives from curation, re-annotation and statistical analysis of selected data from the ArrayExpress Archive of Functional Genomics Data. A simple interface allows the user to query for differential gene expression either 1) by gene names or attributes such as Gene Ontology terms, or 2) by biological conditions, e.g. diseases, organism parts or cell types. The gene queries return the conditions where expression has been reported, while condition queries return which genes are reported to be expressed in these conditions. A combination of both query types is possible. The query results are ranked using various statistical measures and by how many independent studies in the database show the particular gene-condition association. Currently the database contains information about more than 200,000 genes from 9 species and almost 4,500 biological conditions studied in over 30,000 assays from over 1,000 independent studies.

    Institute/s :
    European Bioinformatics Institute, EMBL, Hinxton, United Kingdom
    Address of Institute/s :
    European Bioinformatics Institute, EMBL, Hinxton, United Kingdom
    Country : United Kingdom

    Associated Institutes :

    • European Bioinformatics Institute, EMBL, Hinxton, UK
    • Dana-Farber Cancer Institute, Boston, MA, USA

    Associated Country : USA; United Kingdom


    Authors/Contributors : Misha Kapushesky; Tomasz Adamusiak; Tony Burdett; Aedin Culhane; Anna Farne; Alexey Filippov; Ele Holloway; Andrey Klebanov; Nataliya Kryvych; Natalja Kurbatova; Pavel Kurnosov; James Malone; Olga Melnichuk; Robert Petryszak; Nikolay Pultsin; Gabriella Rustici; Andrew Tikhonov; Ravensara S. Travillian; Eleanor Williams; Andrey Zorin; Helen Parkinson; Alvis Brazma
    Contact Email : ostolop@ebi.ac.uk
    Year : 2011
    Language : English