Advance Search              Latest Recources





















Showing search results (1–2 of 2):

  1. GRSDB (View Publication)
    Full Name of the Resource : G-rich sequences database
    Resource Category : Databases -> RNA -> RNA Sequence, Structure and Functions

    Brief Description : GRSDB: G-Rich Sequences DataBase contains information on composition and distribution of putative Quadruplex forming 'G'-Rich Sequences (QGRS) in the alternatively processed (alternatively spliced or alternatively polyadenylated) mammalian pre-mRNA sequences. The data stored in the GRSDB is based on computational analysis of genomic nucleotide sequences obtained from fully annotated GenBank/RefSeq entries that provide alternative processing information. In addition to providing data on composition and locations of QGRS relative to the processing sites in the pre-mRNA sequence, GRSDB features visual comparison of QGRS distribution patterns among all the alternative RNA products of a gene with the help of dynamically generated graphics. . GRSDB can be accessed at http://bioinformatics.ramapo.edu/grsdb/.
    Subject Area : Alternative Spliced; Gene Sequence


    Institute/s :
    Bioinformatics Group, School of Theoretical and Applied Science, Ramapo College of New Jersey, Mahwah, USA.
    Address of Institute/s :
    Bioinformatics Group, School of Theoretical and Applied Science, Ramapo College of New Jersey, Mahwah, NJ 07430, USA.
    Country : United States

    Associated Institutes :

    • Bioinformatics, School of Theoretical and Applied Science, Ramapo College of New Jersey, Mahwah, NJ 07430, USA

    Associated Country : USA


    Authors/Contributors : Bagga, P.
    Contact Email : pbagga@ramapo.edu
    Year : 2008
    Language : English

    Keywords : Alternative Splicing; Animals; Base Sequence; Computer Graphics; Databases, Nucleic Acid; Guanine / chemistry; Humans; Internet; Mice; RNA 3' End Processing; RNA 3' Polyadenylation Signals; RNA Precursors / chemistry; RNA Splice Sites; RNA, Messenger / chemistry; Regulatory Sequences, Ribonucleic Acid; User-Computer Interface


  2. GRSDB (View Publication)
    Full Name of the Resource : Quadruplex forming \'G\'-Rich Sequences
    Resource Category : Databases -> Structure Databases -> Nucleic acid structure

    Brief Description : GRSDB: Rich Sequences DataBase contains information on composition and distribution of putative Quadruplex forming \'G\'-Rich Sequences (QGRS) in the alternatively processed (alternatively spliced or alternatively polyadenylated) mammalian pre-mRNA sequences. The data stored in the GRSDB is based on computational analysis of genomic nucleotide sequences obtained from fully annotated GenBank/RefSeq entries that provide alternative processing information. In addition to providing data on composition and locations of QGRS relative to the processing sites in the pre-mRNA sequence, GRSDB features visual comparison of QGRS distribution patterns among all the alternative RNA products of a gene with the help of dynamically generated graphics. . GRSDB can be accessed at http://bioinformatics.ramapo.edu/grsdb/.
    Subject Area : Quadruplex forming \'G\'-Rich Sequences


    Institute/s :
    Bioinformatics, School of Theoretical and Applied Science, Ramapo College of New Jersey, Mahwah, NJ 07430, USA
    Address of Institute/s :
    Bioinformatics, School of Theoretical and Applied Science, Ramapo College of New Jersey, Mahwah, NJ 07430, USA
    Country : United States

    Associated Institutes :

    • Bergen County Academies, Hackensack, Ramapo College of New Jersey, Mahwah, NJ, USA
    • Bioinformatics, School of Theoretical and Applied Science, Ramapo College of New Jersey, Mahwah, NJ, USA

    Associated Country : USA


    Authors/Contributors : Oleg Kikin
    Contact Email : pbagga@ramapo.edu
    Year : 2008
    Language : Englsih

    Keywords : Alternative Splicing; Animals; Databases, Nucleic Acid; G-Quadruplexes; Humans; Internet; RNA Precursors / chemistry; RNA, Messenger / chemistry; Rats; Untranslated Regions / chemistry; User-Computer Interface