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  1. Ensembl Genomes
    Full Name of the Resource : Ensembl Genomes
    Resource Category : Databases -> Genomic Databases (Non-Human) -> Fungal Genome Gatabases

    Brief Description : Ensembl Genomes (http://www.ensemblgenomes.org) is a new portal offering integrated access to genome-scale data from non-vertebrate species of scientific interest, developed using the Ensembl genome annotation and visualisation platform. Ensembl Genomes consists of five sub-portals (for bacteria, protists, fungi, plants and invertebrate metazoa) designed to complement the availability of vertebrate genomes in Ensembl. Many of the databases supporting the portal have been built in close collaboration with the scientific community, which we consider as essential for maintaining the accuracy and usefulness of the resource. A common set of user interfaces (which include a graphical genome browser, FTP, BLAST search, a query optimised data warehouse, programmatic access, and a Perl API) is provided for all domains. Data types incorporated include annotation of (protein and non-protein coding) genes, cross references to external resources, and high throughput experimental data (for example, data from large scale studies of gene expression and polymorphism visualised in their genomic context). Additionally, extensive comparative analysis has been performed, both within defined clades and across the wider taxonomy, and sequence alignments and gene trees resulting from this can be accessed through the site. Ensembl Genomes is updated 4-6 times a year.
    Subject Area : Fungal Genomics; Fungal Genome


    Institute/s :
    The European Bioinformatics Institute, UK
    Address of Institute/s :
    EMBL Outstation - The European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, United Kingdom
    Country : United Kingdom

    Associated Institutes :

    • The European Bioinformatics Institute, EMBL Outstation - The European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, United Kingdom UK

    Associated Country : United Kingdom


    Authors/Contributors : Kersey, P.J.
    Contact Email : pkersey@ebi.ac.uk
    Year : 2010
    Language : English

    Keywords : Animals; Computational Biology/*methods/trends; *Databases, Genetic; *Databases, Nucleic Acid; Gene Expression; Genome, Bacterial; Genome, Fungal; Genome, Plant; Information Storage and Retrieval/methods; Internet; Invertebrates/genetics; Polymorphism, Genetic; Protein Structure, Tertiary; Software