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  1. EXProt (View Publication)
    Full Name of the Resource : Sequences of proteins with experimentally verified function
    Resource Category : Databases -> Protein Sequence Databases -> General sequence databases

    Brief Description : EXProt is a non-redundant protein database containing a selection of entries from genome annotation projects and public databases, aiming at including only proteins with an experimentally verified function. In EXProt release 2.0 we have collected entries from the Pseudomonas aeruginosa community annotation project (PseudoCAP), the E. coli genome and proteome database (GenProtEC) and the translated coding sequences from the Prokaryotes division of EMBL nucleotide sequence database, which are described to have an experimentally verified function. Each entry in EXProt has a unique ID number and contains information about the species, amino acid sequence, functional annotation and in most cases links to references in Medline/PubMed and to the entry in the original database. EXProt is indexed in SRS at CMBI (http://www.cmbi.kun.nl/srs/) and can be searched with BLAST and FASTA through the EXProt web page (http://www.cmbi.kun.nl/EXProt/).
    Subject Area : Non-Redundant Protein


    Institute/s :
    Centre for Molecular and Biomolecular Informatics (CMBI), University of Nijmegen, GL, Nijmegen, The Netherlands
    Address of Institute/s :
    Centre for Molecular and Biomolecular Informatics (CMBI), University of Nijmegen, P.O. Box 9010, 6500 GL, Nijmegen, The Netherlands
    Country : Netherlands

    Associated Institutes :

    • Centre for Molecular and Biomolecular Informatics (CMBI), University of Nijmegen, PO Box 9010, 6500 GL Nijmegen, The Netherlands
    • NIZO Food Research, PO Box 20, 6710 BA Ede, The Netherlands

    Associated Country : Netherlands


    Authors/Contributors : Ursing, B.M.; van Enckevort, F.H.J; Leunissen, J.A.M; Siezen, R.J.
    Contact Email : ursing@cmbi.kun.nl
    Year : 2001
    Language : English

    Keywords : Animals; Bacterial Proteins / genetics / physiology; Databases, Nucleic Acid; Databases, Protein; Escherichia coli / genetics / physiology; Forecasting; Genome, Bacterial; Information Storage and Retrieval; Internet; Proteins / genetics / physiology; Proteome; Pseudomonas aeruginosa / genetics / physiology; Quality Control


  2. EXProt (View Publication)
    Full Name of the Resource : Sequences of proteins with experimentally verified function
    Resource Category : Databases -> Protein Sequence Databases -> General Protein Sequence Databases

    Brief Description : EXProt is a non-redundant protein database containing a selection of entries from genome annotation projects and public databases, aiming at including only proteins with an experimentally verified function. In EXProt release 2.0 we have collected entries from the Pseudomonas aeruginosa community annotation project (PseudoCAP), the E. coli genome and proteome database (GenProtEC) and the translated coding sequences from the Prokaryotes division of EMBL nucleotide sequence database, which are described to have an experimentally verified function. Each entry in EXProt has a unique ID number and contains information about the species, amino acid sequence, functional annotation and in most cases links to references in Medline/PubMed and to the entry in the original database. EXProt is indexed in SRS at CMBI (http://www.cmbi.kun.nl/srs/) and can be searched with BLAST and FASTA through the EXProt web page (http://www.cmbi.kun.nl/EXProt/).
    Subject Area : Non-Redundant Protein; Genome; Proteome


    Institute/s :
    Centre for Molecular and Biomolecular Informatics, University of Nijmegen, The Netherlands.
    Address of Institute/s :
    Centre for Molecular and Biomolecular Informatics, University of Nijmegen, The Netherlands.
    Country : Netherlands

    Associated Institutes :

    • Centre for Molecular and Biomolecular Informatics (CMBI), University of Nijmegen, PO Box 9010, 6500 GL Nijmegen, The Netherlands
    • NIZO Food Research, PO Box 20, 6710 BA Ede, The Netherland

    Associated Country : Netherlands


    Authors/Contributors : Ursing, B.M.
    Contact Email : ursing@cmbi.kun.nl
    Year : 2002
    Language : English

    Keywords : Amino Acid Sequence; Bacterial Proteins / metabolism; Databases, Nucleic Acid; Databases, Protein; Molecular Sequence Data; Pseudomonas aeruginosa; Quality Control; Software; User-Computer Interface