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  1. DDIB
    Full Name of the Resource : Database of domain interactions and binding
    Resource Category : Databases -> Metabolic and Signaling Pathways -> Protein-Protein Interactions

    Brief Description : Protein domains, modules of amino acid sequence with specific evolutionarily conserved motifs, are the structural or functional units that participate in intermolecular interactions. Information about domain interactions has been accumulated, but are buried in literatures or scattered in various laboratories, thus, hard for users to find them. The Database of Domain Interactions and Bindings (DDIB) collects information about domain-domain interactions and domain interactions with biological molecules such as nucleotides, peptides, inorganic ions, phospholipids. Some data were extracted By Natural Language Processing (NLP) method from publication abstracts included in MEDLINE, and some were collected from other public databases, research laboratories and individual scientists. In addition, DDIB includes many putative domain-domain interactions inferred from documented protein-protein interactions. To provide comprehensive knowledge of a domain, DDIB also includes relevant information from PFAM database, GO and KEGG. DDIB is freely accessible from

    Institute/s :
    Bioinformatics Center, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200031, China
    Shanghai Center for Bioinformation Technology, Shanghai 200235, China
    Department of Computer Science, Shanghai Normal University, Shanghai 200234, China

    Country : China

    Authors/Contributors : Li, Y.X.
    Contact Email :
    Language : English