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  1. DATF
    Full Name of the Resource : Database of Arabidopsis transcription factors
    Resource Category : Databases -> Plant Databases -> Arabidopsis thaliana

    Brief Description : The Database of Arabidopsis Transcription Factors (DATF) collects all Arabidopsis transcription factors (totally 1922 Loci; 2290 Gene Models) and classifies them into 64 families.The Version 2 of DATF was updated at July 2006. It is based on the Arabidopsis Sequence of TAIR version 6 (20051108). It uses not only locus (gene), but also gene model (transcript, protein) and the detail information is for each gene model not for locus. It add multiple alignment of the DNA-binding domain of each family, Neighbor-Joining phylogenectic tree of each family, the GO annotation, homolog with the Database of Rice Transcription Factors(DRTF) . It also keeps old information items such as the uniq cloned and sequenced information of about 1200 transcription factors, protein domains, 3Dstructure information with BLAST hits against PDB , predicted Nuclear Location Signals, UniGene information, as well as links to literature reference.

    Institute/s :
    Centre for BioInformatics, Peking University, Beijing, 100871, PR China
    Address of Institute/s :
    Centre for BioInformatics, Peking University, Beijing, 100871, PR China
    Country : China

    Associated Institutes :

    • Centre for BioInformatics, Peking University, Beijing, 100871, PR China

    Associated Country : China


    Contact Email : datf@mail.cbi.pku.edu.cn
    Year : 2006