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  1. CyMoBase (View Publication)
    Full Name of the Resource : Cytoskeletal and motor proteins database
    Resource Category : Databases -> Protein Sequence Databases -> Databases of Individual Protein Families

    Brief Description : CyMoBase is an online database for manually annotated protein sequences of cytoskeletal and motor proteins and associated information. It currently offers more than 3000 sequences from 26 proteins in more than 350 species. Meta information linked to sequences are: 564 Publications, NCBI nucleotide and protein IDs, coiled coil and domain predictions from parcoil2, pfam and prosite. Sequences are categorized into classes based on phylogenetic analysis. CyMoBase has a user friendly web interface with different search modules for precise and fast definition of complex search queries. Perspectives on search results ,featuring rich dynamically generated graphics, include: Sequence details, protein inventory by species, domain composition, class composition, molecular weight histogram and FASTA file download. Additionally, searches can be saved and monitored. CyMoBase is accessible from http: / / www.motorproteins.de / cymobase / .
    Subject Area : Motor Protein


    Institute/s :
    Department of NMR-based Structural Biology, Max-Planck-Institute for Biophysical Chemistry, Goettingen, Germany
    Address of Institute/s :
    Department of NMR-based Structural Biology, Max-Planck-Institute for Biophysical Chemistry, Am Fassberg 11, 37077 Goettingen, Germany
    Country : Germany

    Associated Institutes :

    • Department of NMR-based Structural Biology, Max-Planck-Institute for Biophysical Chemistry, Am Fassberg 11, 37077 Goettingen, Germany

    Associated Country : Germany


    Authors/Contributors : Kollmar M.
    Contact Email : mako@nmr.mpibpc.mpg.de
    Year : 2006
    Language : English

    Keywords : Amino Acid Sequence; Computational Biology / methods; Cytoskeletal Proteins / chemistry / genetics; Databases, Protein; Internet; Molecular Motor Proteins / *chemistry / genetics; Programming Languages; Proteomics / methods; Software; User-Computer Interface