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Showing search results (1–2 of 2):

  1. CorreLogo (View Publication)
    Resource Category : Webserver -> RNA -> Structure Prediction, Visualization, and Design

    Brief Description : CorreLogo generates a 3D sequence logo for RNA or DNA alignments. The first two dimensions of the sequence logo display information about the information content and residue composition of individual columns of the alignment. The 3D sequence logo consists of a square matrix that shows columns with high mutual information, a measure of how much the residues in two alignment columns are correlated.

    Institute/s :
    Basic Research Program, SAIC-Frederick, NCI-Frederick, Frederick, MD 21702, USA.
    Address of Institute/s :
    Basic Research Program, SAIC-Frederick, NCI-Frederick, Frederick, MD 21702, USA.
    Country : United States


    Authors/Contributors : Bindewald E, Schneider TD, Shapiro BA.
    Contact Email : bshapiro@ncifcrf.gov
    Year : 2006



  2. CorreLogo (View Publication)
    Resource Category : Webserver -> Sequence Comparison -> Analysis of Aligned Sequences

    Brief Description : CorreLogo generates a 3D sequence logo for RNA or DNA alignments. The first two dimensions of the sequence logo display information about the information content and residue composition of individual columns of the alignment. The 3D sequence logo consists of a square matrix that shows columns with high mutual information, a measure of how much the residues in two alignment columns are correlated.

    Institute/s :
    Basic Research Program, SAIC-Frederick, NCI-Frederick, Frederick, MD 21702, USA.
    Address of Institute/s :
    Basic Research Program, SAIC-Frederick, NCI-Frederick, Frederick, MD 21702, USA.
    Country : United States


    Authors/Contributors : Bindewald E, Schneider TD, Shapiro BA.
    Contact Email : bshapiro@ncifcrf.gov
    Year : 2006