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  1. CSDBase (View Publication)
    Full Name of the Resource : Cold Shock Domain database
    Resource Category : Databases -> Protein Sequence Databases -> Databases of Individual Protein Families

    Brief Description : CSDBase (http: / / www.chemie.uni-marburg.de / ~csdbase / ) is an interactive Internet-embedded research platform providing detailed information on cold shock domain-containing proteins and bacterial cold shock responses. In its second release, access to CSDBase is completely independent of a specific computer system and / or browser and care has been taken to fully preserve the outfit and user interfaces of the initial version to provide convenient usage. In addition to the updated literature references, protein information and CSD-containing protein structure model content present in CSDBase, we have integrated a new database subcore harboring the entire results of the first DNA macroarray study of cold shocked Bacillus subtilis cells. These data can be searched and ranked according to multiple features such as gene name, gene expression at 37°C or 15°C, cold-induction factor, etc. and comprise all genes of the B. subtilis genome. On the basis of the flexible architecture of CSDBase we would like to invite researches from other work groups to integrate their data into this database after publication in order to (i) establish a central archive for world-wide accessible DNA array results of cold shocked bacteria, and (ii) overcome the usually reduced information content of array data publications that results from space limitations in scientific journals.
    Subject Area : Cold Shock Domain Protein


    Institute/s :
    Philipps-Universität Marburg, FB Chemie, Hans-Meerwein-Str., D-35032 Marburg, Germany
    Address of Institute/s :
    Philipps-Universität Marburg, FB Chemie, Hans-Meerwein-Str., D-35032 Marburg, Germany
    Country : Germany

    Associated Institutes :

    • Philipps-Universität Marburg, FB Chemie, Hans-Meerwein-Straße, D-35032 Marburg, Germany

    Associated Country : Germany


    Authors/Contributors : Weber, M.H.W.
    Contact Email : weberm@mailer.uni-marburg.de
    Year : 2002
    Language : English

    Keywords : Amino Acid Sequence; Bacterial Physiological Phenomena; Bacterial Proteins / chemistry; Cold Temperature; Computer Graphics; Databases, Protein; Forecasting; Information Storage and Retrieval; Internet; Models, Molecular; Protein Structure, Tertiary; Sequence Homology, Amino Acid; User-Computer Interface