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  1. Bhageerath
    Full Name of the Resource : Bhageerath
    Resource Category : Software -> Proteomics -> Proteomics

    Brief Description : Predicts native-like structures for small globular proteins. Bhageerath is an energy based computer software suite for narrowing down the search space of tertiary structures of small globular proteins. The protocol comprises eight different computational modules that form an automated pipeline. It combines physics based potentials with biophysical filters to arrive at 5 plausible candidate structures starting from sequence and secondary structure information. The methodology has been validated here on 50 small globular proteins consisting of 2–3 helices and strands with known tertiary structures. For each of these proteins, a structure within 3–6 Å RMSD (root mean square deviation) of the native has been obtained in the 10 lowest energy structures.
    Subject Area : Proteomics


    Institute/s :
    Indian Institute of Technology, Delhi
    Address of Institute/s :
    Supercomputing Facility for Bioinformatics & Computational Biology, 3rd Floor, Synergy Building, Indian Institute of Technology, Hauz Khas, New Delhi - 110 016. INDIA Phone: +91-11-26596786 E-mail : scfbio@scfbio-iitd.res.in
    Country : India


    Authors/Contributors : Professor B. Jayaram
    Name of the Developer : Super Computing Facility for Bioiformatics and Computational Biology, IIT Delhi
    Address of the Developer : Super Computing Facility for Bioiformatics and Computational Biology, IIT Delhi