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  1. BGED (View Publication)
    Full Name of the Resource : Brain Gene Expression Database
    Resource Category : Databases -> Human Genes and Diseases -> Gene-System or Disease-Specific Databases

    Brief Description : This database contains gene expression data for various physiological and pathological processes in the mouse brain. The data have been obtained by adaptor-tagged competitive PCR (ATAC-PCR), an advanced version of quantitative PCR. Assayed genes were selected from our mouse brain EST collection deposited in BED (Brain EST Database, http://love2.aist-nara.ac.jp/BED ). The current BGED contains data for 3656 genes. Gene expression data can be retrieved either by ID numbers or by keywords representing functional annotations. The ID numbers include GenBank, RefSeq, SwissProt, Gene Ontology, and BED (our own ID). The keyword search is based either on definition in GenBank, SwissProt and RefSeq, functional annotation of SwissProt database, or Gene Ontology terms. Gene expression data are displayed as mosaic plots. A search function based on the similarity of gene expression is available. Currently, BGED includes data for postnatal development of cerebellar cortex and dentate gyrus of hippocumpus, aging, ischemia and effects of antipsychotic agents.

    Institute/s :
    Taisho Laboratory of Functional Genomics, Nara Institute of Science and Technology, Core Reserach for Evolutional Science and Technology, Japan Science and Technology Corporation, 8916-5, Takayama, Nara, 630-0101, JAPAN
    Address of Institute/s :
    Taisho Laboratory of Functional Genomics, Nara Institute of Science and Technology, Core Reserach for Evolutional Science and Technology, Japan Science and Technology Corporation, 8916-5, Takayama, Nara, 630-0101, JAPAN
    Country : Japan


    Authors/Contributors : Kato K; Matoba R; Saito S; Matsubara K
    Contact Email : kkato@bs.aist-nara.ac.jp
    Language : English