Advance Search              Latest Recources





















Showing search results (1–1 of 1):

  1. BCIpep (View Publication)
    Full Name of the Resource : Database of B-cell epitopes
    Resource Category : Databases -> Immunological Databases -> Immunological Databases

    Brief Description : B-cell epitopes are vital in designing peptide-based vaccine, in diseases diagnosis and also for allergy research. This practical importance creates a need for an integrated source of information about them. We developed a databaseBcipep, of experimentally determined B-cell epitopes of antigenic proteins. This is a curated database where detailed information about the epitopes are collected and compiled from published literature and existing databases. It covers a wide range of pathogenic organisms like virus, bacteria, protozoa and fungi. Each entry in database provides full information about a B-cell epitope that includes amino acid sequences, source of the antigenic protein, immunogenicity, model organism and antibody generation/neutralization test. The database have number of web tools and user friendly web interface which allows user to perform various tasks; i) keyword search on any field; ii) mapping of known peptides (B-cell epitope) on a given antigen sequence; iii) BLAST search etc. It also provides links to various databases such as GenBank, PDB, SWISS-PROT and MHCBN for further detailed information about epitopes. The database now contains 2700 entries including 1350 epitopes in the non-redundant datasets. Bcipep is accessible from the website at http://www.imtech.res.in/raghava/bcipep/ and at http://bioinformatics.uams.edu/mirror/bcipep/ (Mirror site). All available resources can be assessed via SRR interface from IMTECH or EBI site http://www.imtech.res.in/srs5bin/cgi-bin/wgetz?-fun+pagelibinfo+-info+BCIPEP
    Subject Area : Immunology


    Institute/s :
    Institute of Microbial Technology, Sector-39A, Chandigarh, India
    Address of Institute/s :
    Institute of Microbial Technology, Chandigarh, India
    State : Chandigarh (U. T.)
    Country : India

    Associated Institutes :

    • Institute of Microbial Technology, Chandigarh, India

    Associated Country : India


    Contact Email : raghava@imtech.res.in
    Year : 2005
    Language : English

    Keywords : B-Lymphocytes / metabolism; Databases, Bibliographic; Databases, Protein; Epitopes, B-Lymphocyte / chemistry; Genomics / methods; Humans; Internet; Peptide Mapping; Peptides / chemistry; Proteomics / methods; Sequence Analysis, Protein; Software