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1. AGRIS (View Publication)
   Full Name of the Resource : Arabidopsis gene regulatory information server
   Resource Category : Databases -> Plant databases -> Arabidopsis thaliana
   
   Brief Description : AGRIS is an information resource of Arabidopsis promoter sequences, transcription factors and their target genes. AGRIS currently contains two databases, AtTFDB (Arabidopsis thaliana transcription factor database) and AtcisDB (Arabidopsis thaliana cis-regulatory database). AtTFDB contains information on approximately 1,500 transcription factors identified through motif searches and grouped into families, based on the presence of conserved domains. AtTFDB links the sequence of the transcription factors with available mutants and, when known, with the possible genes they may regulate. AtcisDB consists of the 5' regulatory sequences of all 29,388 annotated genes with a description of the corresponding cis-regulatory elements. Users can search the databases for (i) promoter sequences, (ii) a transcription factor, (iii) a direct target gene for a specific transcription factor, or (vi) a regulatory network that consists of transcription factors and their target genes.
   Subject Area : Arabidopsis Thaliana
   
   
   Institute/s :
   Division of Human Cancer Genetics, Comprehensive Cancer Center, Department of Molecular Virology, Immunology and Medical Genetics, Ohio State University, USA
   Address of Institute/s :
   Division of Human Cancer Genetics, Comprehensive Cancer Center, Department of Molecular Virology, Immunology and Medical Genetics, Ohio State University, Columbus, OH 43210, USA
   Country : United States
   
   Associated Institutes :

   • Division of Human Cancer Genetics, Comprehensive Cancer Center, Department of Molecular Virology, Immunology and Medical Genetics, Ohio State University, Columbus, OH 43210, USA
   • Department of Plant Cellular and Molecular Biology, and Plant Biotechnology Center, The Ohio State University, Columbus, OH 43210, USA
   
   Associated Country : USA
   
   
   Contact Email : Davuluri-1@medctr.osu.edu
   Year : 2003
   Language : English
   
   Keywords : 3' Untranslated Regions/genetics/physiology; 5' Untranslated Regions/genetics/physiology; Arabidopsis/genetics; Arabidopsis Proteins/genetics/physiology; Computer Graphics/trends; Database Management Systems/trends; Databases, Genetic/trends; Gene Expression Regulation, Plant/genetics/physiology; Genes, Plant/genetics/physiology; Information Systems/trends; Internet; Regulatory Sequences, Nucleic Acid/genetics/physiology; Trans-Activators/genetics/physiology; Transcription Factors/genetics/physiology; User-Computer Interface