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Showing search results (21–30 of 182):

  1. CAMP
    Resource Category : Databases -> Other Molecular Biology Databases -> Drugs and drug design

    Brief Description : Collection of Anti-Microbial Peptides

    Institute/s :
    National Institute for Research in Reproductive Health, Mumbai, India
    Address of Institute/s :
    National Institute for Research in Reproductive Health, Mumbai, India
    State : Mumbai
    Country : India

    Associated Institutes :

    • Biomedical Informatics Center of Indian Council of Medical Research, National Institute for Research in Reproductive Health, Mumbai, India
    • School of Informatics, Indiana University, Indianapolis, IN 46202, USA
    • SECG, Center for Development of Advanced Computing, Pune University Campus, Pune, India

    Associated Country : India; USA


    Authors/Contributors : Shaini Thomas; Shreyas Karnik; Ram Shankar Barai; V. K. Jayaraman; Susan Idicula-Thomas
    Contact Email : thomass@nirrh.res.in
    Year : 2009
    Language : English


  2. CancerResource
    Resource Category : Databases -> Human Genes and Diseases -> Human Genes and Diseases

    Brief Description : Cancer-relevant proteins and compound interactions

    Institute/s :
    Charite – University Medicine Berlin, Germany
    Address of Institute/s :
    Charite – University Medicine Berlin, Germany
    State : Berlin
    Country : Germany

    Associated Institutes :

    • Charite – University Medicine Berlin, Institute for Physiology, Structural Bioinformatics Group, Thielallee 71, 14195 Berlin, Germany

    Associated Country : Germany


    Authors/Contributors : Jessica Ahmed; Thomas Meinel; Mathias Dunkel; Manuela S. Murgueitio; Robert Adams; Corinna Blasse; Andreas Eckert; Saskia Preissner; Robert Preissner
    Contact Email : robert.preissner@charite.de
    Year : 2010
    Language : English


  3. canSAR
    Resource Category : Databases -> Human Genes and Diseases -> Cancer gene databases

    Brief Description : Integrated cancer research and drug discovery resource

    Institute/s :
    Institute of Cancer Research, Haddow Laboratories, Belmont, Surrey, SM2 5NG, United Kingdom
    Address of Institute/s :
    Institute of Cancer Research, Haddow Laboratories, Belmont, Surrey, SM2 5NG, United Kingdom
    Country : United Kingdom

    Associated Institutes :

    • Cancer Research UK Cancer Therapeutics Unit, Institute of Cancer Research, Haddow Laboratories, Belmont, Surrey, SM2 5NG, UK

    Associated Country : United Kingdom


    Authors/Contributors : Mark D. Halling-Brown; Krishna C. Bulusu; Mishal Patel; Joe E. Tym; Bissan Al-Lazikani
    Contact Email : bissan.al-lazikani@icr.ac.uk
    Year : 2011
    Language : English


  4. CaSNP
    Resource Category : Databases -> Human Genes and Diseases -> Cancer gene databases

    Brief Description : Cancer SNP data on copy number alterations

    Institute/s :
    Harvard School of Public Health, Boston, MA 02115, USA
    Address of Institute/s :
    Harvard School of Public Health, Boston, MA 02115, USA
    Country : USA

    Associated Institutes :

    • State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, The First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, 310012, China
    • Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Harvard School of Public Health, Boston, MA 02115, USA
    • Department of Bioinformatics, School of Life Science and Technology, Tongji University, Shanghai, 200092, China

    Associated Country : China; USA


    Authors/Contributors : Qingyi Cao; Meng Zhou; Xujun Wang; Cliff A. Meyer; Yong Zhang; Zhi Chen; Cheng Li; X. Shirley Liu
    Contact Email : xliu@hsph.harvard.edu
    Year : 2010
    Language : English


  5. cBARBEL
    Resource Category : Databases -> Human and other Vertebrate Genomes -> Model organisms, comparative genomics

    Brief Description : Catfish genome database

    Institute/s :
    Auburn University, Auburn, AL 36849, USA
    Address of Institute/s :
    Auburn University, Auburn, AL 36849, USA
    Country : USA

    Associated Institutes :

    • The Fish Molecular Genetics and Biotechnology Laboratory, Aquatic Genomics Unit, Department of Fisheries and Allied Aquacultures and Program of Cell and Molecular Biosciences, Auburn University, Auburn, AL 36849
    • Department of Computer Science and Software Engineering, Auburn University, Auburn, AL 36849
    • Department of Animal Science and Center for Integrated Animal Genomics, Iowa State University, Ames, IA, USA

    Associated Country : USA


    Authors/Contributors : Jianguo Lu; Eric Peatman; Qing Yang; Shaolin Wang; Zhiliang Hu; James Reecy; Huseyin Kucuktas; Zhanjiang Liu
    Contact Email : zliu@acesag.auburn.edu
    Year : 2010
    Language : English


  6. CCDS
    Resource Category : Databases -> Human and other Vertebrate Genomes -> Model organisms, comparative genomics

    Brief Description : The Consensus CoDing Sequence (CCDS) project identifies the position of protein-coding regions of human and mouse genes that are annotated consistently by the collaborators and are supported by transcript evidence, use of canonical splice sites, and other quality assurance measures. The CCDS set is calculated after a coordinated whole-genome annotation update by the collaborating annotation groups: NCBI, EBI, and WTSI. The CCDS set includes only those protein coding annotations that precisely agree in every exon placement across the entire coding region. UCSC provides independent and intensive quality control procedures augmented by work from the other groups. Once a coding gene structure is agreed, it will be maintained for future releases unless there is good evidence to modify or remove it. The collaboration has improved independent annotation methods (both computational analysis and manual annotation) and we expect continued growth in the CCDS set as more gene structures and more organisms are included in the collection. The long-term goal of the CCDS project is to converge toward a full set of standard gene annotations for finished high-quality genomes. We anticipate that through continued manual review, experimental validation of weakly supported genes, and as automatic annotation methods continue to improve, the CCDS set will become more complete. The CCDS web site (http://www.ncbi.nlm.nih.gov/CCDS/) provides information about CCDS and sequence identifiers, the CDS data as both coordinates and sequence, and links to genome browsers. WTSI, UCSC, EBI and NCBI web sites indicate genome annotation data that have a CCDS status.

    Institute/s :
    National Center for Biotechnology Information
    National Library of Medicine
    National Institutes of Health

    Address of Institute/s :
    8600 Rockville Pike, Bethesda, MD 20894,
    Country : USA


    Authors/Contributors : Pruitt K.; Ashurst J.; Maglott D.; Diekhans M.; Ostell J.; Haussler D.; Birney E.; Searles S.; Hubbard T.; Durbin R.
    Contact Email : info@ncbi.nlm.nih.gov
    Year : 2011



  7. CGED - Cancer Gene Expression Database
    Resource Category : Databases -> Human Genes and Diseases -> Cancer gene databases

    Brief Description : CGED (Cancer Gene Expression Database) is a database containing gene expression profiles and accompanying clinical information. The data in CGED have been obtained through collaborative efforts made at the Nara Institute of Science and Technology and Osaka University School of Medicine to identify genes of clinical importance. The expression data have been obtained by a high-throughput RT-PCR technique (adaptor-tagged competitive PCR) (1), and patients were recruited mainly from a single hospital. The quality of the data has been demonstrated by successful identification of diagnostic genes (2-3). In CGED, the expression and clinical data are presented in a way useful for scientists interested in specific genes or biological functions. The data can be retrieved either using gene identifiers or by functional categories defined by Gene Ontology terms or the SwissProt annotation. Gene expression data are displayed in mosaic plots, and expression patterns of multiple genes, selected by names or similarity search of the patterns, can be compared. The sorting function enables users for easy recognition of relationships between gene expression and clinical parameters. Currently, data on breast, colorectal, and hepatocellular cancers are available.

    Institute/s :
    Taisho Laboratory of Functional Genomics, Japan.
    Address of Institute/s :
    Nara Institute of Science and Technology, 8916-5, Takayama, Nara 630-0101,
    Country : Japan

    Associated Institutes :

    • Human Genome Center, Institute of Medical Science, University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639, Japan
    • Department of Computational Biology, Graduate School of Frontier Sciences, University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8561, Japan

    Associated Country : Japan


    Authors/Contributors : Kato K.; Yamashita R.; Takagi T.; Nakai K.
    Contact Email : kkato@bs.aist-nara.ac.jp
    Year : 1997


  8. ChEMBL
    Resource Category : Databases -> Other Molecular Biology Databases -> Drugs and drug design

    Brief Description : EMBL\'s database of bioactive drug-like small molecules

    Institute/s :
    EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, United Kingdom
    Address of Institute/s :
    EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, United Kingdom
    State : Cambridge
    Country : United Kingdom

    Associated Institutes :

    • EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SD
    • David Michalovich Scientific Consulting, London
    • Cancer Research UK Cancer Therapeutics Unit, Institute of Cancer Research, 15 Cotswold Road, Belmont, Surrey, SM2 5NG, UK

    Associated Country : United Kingdom


    Authors/Contributors : Anna Gaulton; Louisa J. Bellis; A. Patricia Bento; Jon Chambers; Mark Davies; Anne Hersey; Yvonne Light; Shaun McGlinchey; David Michalovich; Bissan Al-Lazikani; John P. Overington
    Contact Email : jpo@ebi.ac.uk
    Year : 2011
    Language : English


  9. ChemProt
    Resource Category : Databases -> Metabolic and Signaling Pathways -> Metabolic and Signaling Pathways

    Brief Description : Disease Chemical Biology Database

    Institute/s :
    Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark
    Address of Institute/s :
    Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark
    Country : Denmark

    Associated Institutes :

    • Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark
    • Department of Computational Chemistry, Institute of Chemistry, Romanian Academy, Timisoara 300223, Romania
    • Department of Biochemistry and Molecular Biology, Division of Biocomputing, University of New Mexico School of Medicine, Albuquerque, New Mexico 87131, USA

    Associated Country : Denmark; USA


    Authors/Contributors : Olivier Taboureau; Sonny Kim Nielsen; Karine Audouze; Nils Weinhold; Daniel Edsgard; Francisco S. Roque; Irene Kouskoumvekaki; Alina Bora; Ramona Curpan; Thomas Skot Jensen; Soren Brunak; Tudor I. Oprea
    Contact Email : otab@cbs.dtu.dk
    Year : 2010
    Language : English


  10. COLT-Cancer
    Resource Category : Databases -> Human Genes and Diseases -> Cancer gene databases

    Brief Description : Essential gene profiles in human cancer cell lines

    Institute/s :
    University of Toronto, 160 College St., Toronto, ON M5S 3E1, Canada
    Address of Institute/s :
    University of Toronto, 160 College St., Toronto, ON M5S 3E1, Canada
    State : Toronto
    Country : Canada

    Associated Institutes :

    • Banting and Best Department of Medical Research, Department of Molecular Genetics, Donnelly Centre, University of Toronto, 160 College St., Toronto, ON M5S 3E1
    • Ontario Institute for Cancer Research, 101 College St Suite 800, Toronto, ON, Canada M5G 0A3

    Associated Country : Canada


    Authors/Contributors : Judice L. Y. Koh; Kevin R. Brown; Azin Sayad; Dahlia Kasimer; Troy Ketela; Jason Moffat
    Contact Email : j.moffat@utoronto.ca
    Year : 2011
    Language : English


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